Publications

See the topic page for a publication list by topic.

2011 (3)

Oscar Acosta, Jurgen Fripp, Vincent Dore, Pierrick Bourgeat, Jean-Marie Favreau, Gaël Chételat, Andrea Rueda, Victor L. Villemagne, Cassandra Szoeke, David Ames, Kathryn A. Ellis, Ralph N. Martins, Colin L. Masters, Christopher C. Rowe, Erik Bonner, Florence Gris, Di Xiao, Parnesh Raniga, Vincent Barra, Olivier Salvado Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease. Journal of Neuroscience Methods pp. - . (2011). doi web bibtex

@article{Acosta2011,
title = "Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease",
journal = "Journal of Neuroscience Methods",
volume = "",
number = "0",
pages = " - ",
year = "2011",
note = "",
issn = "0165-0270",
doi = "10.1016/j.jneumeth.2011.12.011",
url = "http://www.sciencedirect.com/science/article/pii/S0165027011007485",
author = "Oscar Acosta and Jurgen Fripp and Vincent Dore and Pierrick Bourgeat and Jean-Marie Favreau and Gaël Chételat and Andrea Rueda and Victor L. Villemagne and Cassandra Szoeke and David Ames and Kathryn A. Ellis and Ralph N. Martins and Colin L. Masters and Christopher C. Rowe and Erik Bonner and Florence Gris and Di Xiao and Parnesh Raniga and Vincent Barra and Olivier Salvado",
 keywords = { medical-imaging,  algorithmic-geometry, recent-publications}
}

J.-M. Favreau, V. Barra Tiling surfaces with cylinders using n-loops. Computers & Graphics 35 ( 02/2011). doi web bibtex

@article {Favreau2011a,
	title = {Tiling surfaces with cylinders using n-loops},
	journal = {Computers & Graphics},
	volume = {35},
	year = {2011},
	month = { 02},
	chapter = {35,42},
	abstract = {Subdividing surfaces into cylinders is a significant question in various applications. Even if specific approaches have been described in several domains, most of the time topological properties are not explicitly handled, and the segmentation remains mainly driven by geometry. We present here an original approach to describe the topological and combinatorial nature of a tiling with cylinders. We first introduce m-cellular complexes, a framework allowing the flexible description of cuttings and tilings. Then we describe n-loops, an extension of the loops for producing tilings with cylinders. Computational issues of n-loops are then addressed, using both topological and geometrical properties of the surface. Finally, we propose two applications, first tiling a surface with large quadrangles patches, and then segmenting surfaces with possible protrusions.},
	issn = {0097-8493},
	doi = {DOI: 10.1016/j.cag.2010.11.001},
	url = {http://www.sciencedirect.com/science/article/B6TYG-51FNPD5-2/2/aa40a592785c035054fd832906c81da1},
	author = {Favreau, J.-M. and Barra, V.},
 keywords = { algorithmic-geometry, recent-publications}
}

Abstract Subdividing surfaces into cylinders is a significant question in various applications. Even if specific approaches have been described in several domains, most of the time topological properties are not explicitly handled, and the segmentation remains mainly driven by geometry. We present here an original approach to describe the topological and combinatorial nature of a tiling with cylinders. We first introduce m-cellular complexes, a framework allowing the flexible description of cuttings and tilings. Then we describe n-loops, an extension of the loops for producing tilings with cylinders. Computational issues of n-loops are then addressed, using both topological and geometrical properties of the surface. Finally, we propose two applications, first tiling a surface with large quadrangles patches, and then segmenting surfaces with possible protrusions.

Chainais P., M. Chevaldonné, J.-M. Favreau Synthèse de textures multifractales directement sur des surfaces 3D. GRETSI Bordeaux, France (09/2011). bibtex

@proceedings {Chainais2011,
	title = {Synthèse de textures multifractales directement sur des surfaces 3D},
	journal = {GRETSI},
	year = {2011},
	month = {09},
	address = {Bordeaux, France},
	author = {Chainais P. and Chevaldonné, M. and Favreau, J.-M.},
 keywords = { procedural-textures, recent-publications}
}

2010 (4)

J.-M. Favreau, V. Barra Tiling surfaces with cylinders using n-loops. In IEEE International Conference on Shape Modeling and Applications (SMI). Aix-en-Provence, France (2010). bibtex

@conference {Favreau2010c,
	title = {Tiling surfaces with cylinders using n-loops},
	booktitle = {IEEE International Conference on Shape Modeling and Applications (SMI)},
	year = {2010},
	address = {Aix-en-Provence, France},
	author = {Favreau, J.-M. and Barra, V.},
 keywords = { algorithmic-geometry, computer-graphics}
}

J.-M. Favreau, S. Biasotti, V. Barra, M. Spagnuolo N-loop computation using scalar functions. In Curves and Surfaces. Avignon, France (2010). bibtex

@conference {Favreau2010b,
	title = {N-loop computation using scalar functions},
	booktitle = {Curves and Surfaces},
	year = {2010},
	address = {Avignon, France},
	author = {Favreau, J.-M. and Biasotti, S. and Barra, V. and Spagnuolo, M.},
 keywords = { algorithmic-geometry, computer-graphics, recent-publications}
}

F. Gris, J.-M. Favreau, O. Acosta, V. Barra, O. Salvado A combined voxel and surface based method for topology correction of brain surfaces. In SPIE medical imaging. San Diego, California, USA (2010). bibtex

@conference {Gris2010,
	title = {A combined voxel and surface based method for topology correction of brain surfaces},
	booktitle = {SPIE medical imaging},
	year = {2010},
	address = {San Diego, California, USA},
	author = {Gris, F. and Favreau, J.-M. and Acosta, O. and Barra, V. and Salvado, O.},
 keywords = { medical-imaging,  algorithmic-geometry}
}

J.-M. Favreau, J. Fayad, L. Agapito Distortion estimation for point clouds and application to motion analysis. In 3DPVT'10 Intl Symp. on 3D Data Processing, Visualization and Transmission. Paris, France (05/2010). bibtex

@conference {Favreau2010a,
	title = {Distortion estimation for point clouds and application to motion analysis},
	booktitle = {3DPVT'10 Intl Symp. on 3D Data Processing, Visualization and Transmission},
	year = {2010},
	month = {05},
	address = {Paris, France},
	author = {Favreau, J.-M. and Fayad, J. and Agapito, L.},
 keywords = { computer-vision}
}

2009 (4)

J.-M. Favreau Outils pour le pavage de surfaces. (2009). web bibtex

@phdthesis{FavreauPhDThesis,
 author =      "Favreau, J.-M.",
 title =       "Outils pour le pavage de surfaces",
 school =      "Université Blaise Pascal",
 year =        2009,
 keywords = { medical-imaging, computer-graphics, algorithmic-geometry, procedural-textures},
 url = "http://tel.archives-ouvertes.fr/tel-00440730/en/"
}

J.-M. Favreau, V. Barra Low-resolution Surface Mapping: a Topological and Geometrical Approach. In EuroCG'09. Brussels, Belgium (2009). bibtex

@conference {Favreau2009c,
	title = {Low-resolution Surface Mapping: a Topological and Geometrical Approach},
	booktitle = {EuroCG'09},
	year = {2009},
	address = {Brussels, Belgium},
	author = {Favreau, J.-M. and Barra, V.},
 keywords = { algorithmic-geometry, computer-graphics}
}

J.-M. Favreau, V. Barra Cutting an Organic Surface. In EuroCG'09. Brussels, Belgium (2009). bibtex

@conference {Favreau2009b,
	title = {Cutting an Organic Surface},
	booktitle = {EuroCG'09},
	year = {2009},
	address = {Brussels, Belgium},
	author = {Favreau, J.-M. and Barra, V.},
 keywords = { algorithmic-geometry, computer-graphics}
}

J.-M. Favreau, V. Barra Conformal Flattening of the Cortical Surface using a Topological and Geometrical Cutting. In SEECCM, South-East European Conference on Computational Mechanics. Island of Rhodes, Greece (2009). bibtex

@conference {Favreau2009a,
	title = {Conformal Flattening of the Cortical Surface using a Topological and Geometrical Cutting},
	booktitle = {SEECCM, South-East European Conference on Computational Mechanics},
	year = {2009},
	address = {Island of Rhodes, Greece},
	author = {Favreau, J.-M. and Barra, V.},
 keywords = { medical-imaging, algorithmic-geometry}
}

2007 (1)

J-M Favreau, S. Hemm, C. Nuti, J. Coste, V. Barra, J.-J. Lemaire A Tool for Topographic Analysis of Electrode Contacts in Human Cortical Stimulation. In MMBIA'07. IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis ICCV 2007. Rio de Janeiro, Brazil (October/2007). bibtex

@InProceedings{Favreau2007,
  author	 = {Favreau, J-M and Hemm, S. and Nuti, C. and Coste, J. and Barra, V. and Lemaire, J.-J. },
  title          = {A Tool for Topographic Analysis of Electrode Contacts in Human Cortical Stimulation},
  bookTitle      = {MMBIA'07},
  month          = {October},
  year           = {2007},
  address        = {Rio de Janeiro, Brazil},
  publisher      = {ICCV 2007},
  journal        = {IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis},
 keywords = { medical-imaging}
}

2005 (3)

J.-M. Favreau, C. Ciofolo, C. Barillot Extraction et étude statistique du sillon calcarin. In MajecSTIC 2005 : Manifestation des Jeunes Chercheurs francophones dans les domaines des STIC . pp. 423-426 . Rennes (2005). web bibtex

@inproceedings{Favreau05,
	title = { Extraction et étude statistique du sillon calcarin},
	author = {Favreau,  J.-M. and Ciofolo, C. and Barillot, C.},
	booktitle = {MajecSTIC 2005 : Manifestation des Jeunes Chercheurs francophones dans les domaines des STIC },
	pages = {423-426 },
	address = {Rennes },
	editor = {Alexandre Vautier, Sylvie Saget },
	year = {2005},
	URL = {http://hal.archives-ouvertes.fr/inria-00000830/en/},
 keywords = { medical-imaging}
}

J.-M. Favreau Atlas probabiliste des frontières fonctionnelles des aires visuelles. (2005). bibtex

@MastersThesis{FavreauMasterThesis,
 author =      "Favreau, J.-M.",
 title =       " Atlas probabiliste des frontières fonctionnelles des aires visuelles",
 school =      "Université de Rennes 1",
 type =        {Mémoire de Master STS},
 year =        2005,
 keywords = { medical-imaging}
}

J. Bézivin, V. Devedzic, D. Djuric, J.-M. Favreau, D. Gasevic, F. Jouault An M3-Neutral infrastructure for bridging model engineering and ontology engineering. In Int. Conf. on Interoperability of Enterprise Software and Applications (INTEROP-ESA). pp. 159-171. Springer. Geneva, Switzerland (2005). bibtex

@InProceedings {Bezivin2005,
  author       = "Bézivin, J. and Devedzic, V. and Djuric, D. and Favreau, J.-M. and Gasevic, D. and Jouault, F.",
  title        = "An M3-Neutral infrastructure for bridging model engineering and ontology engineering",
  booktitle    = "Int. Conf. on Interoperability of Enterprise Software and Applications (INTEROP-ESA)",
  pages        = "159-171",
  year         = "2005",
  editor       = "Springer",
  publisher    = "Springer",
  address      = "Geneva, Switzerland",
  note         = "1-84628-151-2",
}